Information for 6-AGCAACGCGGGCAGCG (Motif 20)

C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
Reverse Opposite:
A G T C A C T G A G T C A G C T C T A G A G T C A G T C A G T C C A T G A G T C A C T G A C G T A C G T A C T G A G T C A G C T
p-value:1e-7
log p-value:-1.810e+01
Information Content per bp:1.780
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets69.3 +/- 26.2bp
Average Position of motif in Background43.8 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCAACGCGGGCAGCG--
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCAACGCGGGCAGCG--
TCAGCACCATGGACAGCTCC
 A C G T A C G T C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AGCAACGCGGGCAGCG
CCGCATAGCAACGGA-------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGCAACGCGGGCAGCG
TACCATAGCAACGGT-------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGCAACGCGGGCAGCG
-NCNCAGCGGGGGGTC
 C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGCAACGCGGGCAGCG
-NCGCAGCGGGGGGTC
 C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AGCAACGCGGGCAGCG
-----TNNGGGCAG--
 C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGCAACGCGGGCAGCG
-DCHCAGCAGGRGGCC
 C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AGCAACGCGGGCAGCG
----NCGCGGACGTTG
 C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGCAACGCGGGCAGCG
GGCACCCAGGGGTGC-
 C T G A A C T G G T A C C G T A G T C A G T A C C T A G G T A C C T A G A C T G C T A G A G T C C T G A C T A G G T A C C T A G
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T