Information for 5-GAACACCCAGCTA (Motif 6)

A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
Reverse Opposite:
A G C T C G T A A C T G A G T C A C G T A C T G A C T G A C T G A C G T C T A G A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.490e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 24.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAACACCCAGCTA
GGACCACCCACG--
 A C G T A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAACACCCAGCTA
GGCCACACCCAN---
 A C G T A C G T A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAACACCCAGCTA
GGCCACACCCA----
 A C G T A C G T A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAACACCCAGCTA
GCCACACCCA----
 A C G T A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GAACACCCAGCTA---
------CCAGCTGTTN
 A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAACACCCAGCTA-
----NAHCAGCTGD
 A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A A C G T
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAACACCCAGCTA
GCGACCACACTG---
 A C G T A C G T A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAACACCCAGCTA
---TGCCCAGNHW
 A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAACACCCAGCTA-
----NNACAGCTGC
 A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A A C G T
A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GAACACCCAGCTA
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A G T C C G T A A G T C A G T C G T A C C G T A A C T G A G T C A C G T C T G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T