Information for 7-AGAAAGGGAAGCCAGS (Motif 12)

C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
Reverse Opposite:
T A G C T G A C G A C T C T A G C T A G T G A C A G C T A G C T G A T C A G T C G T A C A C G T A C G T A G C T A T G C C G A T
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.590
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif120.6
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets47.2 +/- 22.4bp
Average Position of motif in Background52.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAAAGGGAAGCCAGS
AGAAACGAAAGT----
 C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGGGAAGCCAGS
GGAGAAAGGTGCGA----
 A C G T A C G T C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAAAGGGAAGCCAGS
-GAAACTGAAACT---
 C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAAGGGAAGCCAGS--
GGAAAGCGAAACCAAAAC
 C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGAAAGGGAAGCCAGS
-GAAAGTGAAAGT---
 C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGAAAGGGAAGCCAGS
GAGAACCGAAACTG---
 A C G T C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------AGAAAGGGAAGCCAGS
SMCAGTCWGAKGGAGGAGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAAAGGGAAGCCAGS
-GAAASYGAAASY---
 C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGAAAGGGAAGCCAGS
CGGAAGTGAAAC-----
 A C G T C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGAAAGGGAAGCCAGS
ACAAAG----------
 C G T A A T C G T C G A T G C A T G C A C A T G T C A G C T A G C T G A T C G A A C T G G A T C A G T C C T G A A C T G A T C G
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T