Information for 6-GTGCACAGTGGCC (Motif 10)

A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C C T G A A G T C A C G T A C T G G A C T A C T G A G T C G T C A A G T C
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 12.9bp
Average Position of motif in Background33.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTGCACAGTGGCC
NNGTATGTGCACATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTGCACAGTGGCC
NTNTATGTGCACATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGCACAGTGGCC-
NAGGTCANTGACCT
 A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGCACAGTGGCC---
ATGTACAGTAGCAAAG
 A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTGCACAGTGGCC
---CCGATTGGCT
 A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGCACAGTGGCC-
AGGNCANNGTGACCT
 A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTGCACAGTGGCC--
GGTCANNGTGACCTN
 A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTGCACAGTGGCC---
ATTTACAGTAGCAAAA
 A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGCACAGTGGCC
-TGCCCAGNHW--
 A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTGCACAGTGGCC
-TGCGCAGGCGC-
 A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C T G A G T C A G T C
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T