Information for 8-GGCGAYAGACTAC (Motif 8)

A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C T A G A C G T A G T C C G A T T C A G A C G T A G T C A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 26.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCGAYAGACTAC
AGGTGHCAGACA--
 A C G T A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCGAYAGACTAC
AGGTGNCAGACAG-
 A C G T A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCGAYAGACTAC
----BCAGACWA-
 A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGCGAYAGACTAC
GGCGGGAAAH---
 A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGCGAYAGACTAC
TTTGGCGCCAAA----
 A C G T A C G T A C G T A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGCGAYAGACTAC------
--TACGAGACTCCTCTAAC
 A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGCGAYAGACTAC
BTKGGCGGGAAA----
 A C G T A C G T A C G T A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGCGAYAGACTAC------
--CATAAGACCACCATTAC
 A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GGCGAYAGACTAC
GGGCGGGAAGG---
 A C G T A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGCGAYAGACTAC
TGGCGGGAAAHB--
 A C G T A C T G A C T G A G T C C T A G T C G A A G C T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T