Information for 4-ACTGCAGGCT (Motif 3)

G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T
Reverse Opposite:
C G T A C T A G G T A C G T A C A C G T T A C G G T A C C G T A A C T G A C G T
p-value:1e-13
log p-value:-3.071e+01
Information Content per bp:1.773
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif444.7
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets46.1 +/- 28.2bp
Average Position of motif in Background52.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAGGCT-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACTGCAGGCT-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTGCAGGCT-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCAGGCT
DCTCAGCAGG--
 A C G T A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTGCAGGCT-
CACAGCAGGGGG
 A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ETS(ETS)/Promoter/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTGCAGGCT
ACTTCCGGTT
 G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T
C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T

ELF3/MA0640.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCAGGCT-
TTACTTCCGGGTT
 A C G T A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T A C G T
G A C T G A C T C T G A G A T C C G A T A C G T T G A C A G T C A C T G A T C G A T C G C G A T C G A T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTGCAGGCT-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ELF4/MA0641.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCAGGCT-
CACTTCCGGGTT
 A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T A C G T
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTGCAGGCT
CCACTTGAA---
 A C G T A C G T G T C A G T A C C G A T A C T G A T G C C G T A A C T G A C T G A G T C G C A T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T