Information for 10-TAGAAACTTG (Motif 15)

A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C G T A C G T A C G T A G T C A C G T C G T A
p-value:1e-5
log p-value:-1.377e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.2 +/- 34.2bp
Average Position of motif in Background65.5 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAGAAACTTG----
--GWAAYHTGABMC
 A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TAGAAACTTG
---AAGCTTG
 A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAGAAACTTG----
--GWAAYHTGAKMC
 A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAGAAACTTG
AATGGAAAAT--
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAGAAACTTG
SCCTAGCAACAG-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGAAACTTG-
TAACGACACGTGC
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TAGAAACTTG-
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TAGAAACTTG
TATCATTAGAACGCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAGAAACTTG--
TTCTAGAABNTTCTA
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAGAAACTTG
NATGGAAAAN--
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T