Information for 9-AAATATTTTA (Motif 14)

C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A
Reverse Opposite:
G A C T T G C A C G T A T C G A T C G A A G C T C T G A A C G T A G C T A C G T
p-value:1e-6
log p-value:-1.461e+01
Information Content per bp:1.719
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif810.6
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets49.3 +/- 28.2bp
Average Position of motif in Background49.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAATATTTTA
AATTATT---
 C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTTA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTTA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AAATATTTTA--
--CTATTTTTGG
 C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAATATTTTA---
-KCTATTTTTRGH
 C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAATATTTTA-----
TTCTATTTTTAGNNN
 C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAATATTTTA-------
NTNAATTTTATTGNATT
 C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAATATTTTA---
-GCTATTTTTGGM
 C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAATATTTTA---
-GCTATTTTTAGC
 C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A A C G T A C G T A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAATATTTTA---
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T C G T A C T G A G T C A G A C T C T G A A G C T A G C T G C A T A C G T C T G A A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C