Information for 5-AAAGVTGTAATTACAG (Motif 6)

G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G
Reverse Opposite:
A T G C A C G T C T A G G A C T C G T A C G T A C A G T A G C T C T G A A T G C G T C A A G T C A G T C G A C T G A C T A C G T
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.692
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 27.0bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAGVTGTAATTACAG-
-TATTGGTAATTACCTT
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T
A C G T G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PH0022.1_Dlx3/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAGVTGTAATTACAG--
-TCGCGATAATTACCGAC
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T A C G T
A C G T A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PH0072.1_Hoxc8/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGVTGTAATTACAG-
-TTGGGGTAATTAACGT
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T
A C G T A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAAGVTGTAATTACAG---
--GTCGGTAATTATNGNGN
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T A C G T A C G T
A C G T A C G T C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0103.1_Meox1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAAGVTGTAATTACAG---
---GAGGTAATTACCTCAG
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAAGVTGTAATTACAG------
-----TCNCTTTACAGCGNNNT
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PH0053.1_Hoxa6/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAGVTGTAATTACAG-
-NTNAGGTAATTACCTT
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T
A C G T G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

Hoxd3/MA0912.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGVTGTAATTACAG-
-TTGAGTTAATTAACCT
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T
A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGVTGTAATTACAG-
-TTGAGTTAATTAACCT
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G A C G T
A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

MEOX2/MA0706.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAAGVTGTAATTACAG
-----AGTAATTAAC-
 G T C A C G T A C G T A T A C G T A C G C A G T A T C G A G C T T C G A G C T A A C G T C G A T C T G A A G T C C G T A T A C G
A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T