Information for 6-TAGGTGGCAGAAT (Motif 2)

C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
Reverse Opposite:
G C T A C G A T C A G T A G T C A C G T T C A G A G T C A G T C C G T A A G T C A G T C A G C T C G T A
p-value:1e-31
log p-value:-7.222e+01
Information Content per bp:1.782
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.2 +/- 15.1bp
Average Position of motif in Background57.0 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAGAAT
-AGGTGTCA----
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAGGTGGCAGAAT
-GGTTGGCAT---
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAGAAT
-AGGTGTGA----
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAGAAT
-AGGTGTGA----
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAGGTGGCAGAAT
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAGGTGGCAGAAT-
-AGGTGNCAGACAG
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGGTGGCAGAAT
AAGGTGTGAAA--
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAGAAT
-AGGTGTGAAM--
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TAGGTGGCAGAAT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAGGTGGCAGAAT
AAGGTGTGAAAAT
 C G A T C T G A A C T G C T A G C G A T C T A G A C T G A G T C C G T A C T A G G T C A C G T A C G A T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T