Information for 5-AAATATTTTA (Motif 7)

T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A
Reverse Opposite:
C A G T T G C A G T C A G C T A G C T A A C G T T C G A A C G T A G C T A C G T
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.689
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.28%
Number of Background Sequences with motif1690.7
Percentage of Background Sequences with motif3.54%
Average Position of motif in Targets44.3 +/- 30.1bp
Average Position of motif in Background48.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAATATTTTA
AATTATT---
 T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTTA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTTA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAATATTTTA--
--CTATTTTTGG
 T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PHOX2A/MA0713.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAATATTTTA
TAATTAAATTA
 A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PH0028.1_En1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTTA-
GNATTAATTAGTTNNC
 A C G T A C G T A C G T A C G T A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PROP1/MA0715.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAATATTTTA
TAATTAAATTA
 A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PH0149.1_Pou3f4/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTTA--
GANTTAATTAATTAANN
 A C G T A C G T A C G T A C G T A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A A C G T A C G T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T

PH0146.1_Pou3f1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAATATTTTA---
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A A C G T A C G T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

PH0092.1_Lhx2/Jaspar

Match Rank:10
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AAATATTTTA
NNNNNCTAATTAGTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T G C A A G C T T G C A C G A T C G A T C A G T A C G T G T C A
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A