Information for 5-GACATTATAT (Motif 7)

A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T
Reverse Opposite:
C T G A C G A T C G T A C G A T C G T A C G T A A C G T T A C G C G A T A G T C
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.864
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif50.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets40.9 +/- 29.4bp
Average Position of motif in Background50.8 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GACATTATAT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GACATTATAT---
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACATTATAT-----
NANTATTATAATTNNN
 A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GACATTATAT---
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

HOXB2/MA0902.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACATTATAT
AGTAATTAAC-
 A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T
T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACATTATAT-----
TAAGATTATAATACGG
 A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T A C G T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACATTATAT
RGGATTAR--
 A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACATTATAT
AGTAATTAAC-
 A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACATTATAT
GGTAATTAGC-
 A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACATTATAT
GGTAATTAGC-
 A C G T A C T G C G T A A T G C C G T A A C G T A C G T C G T A A C G T C G T A A G C T
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T