Information for 5-GGCACTGTCTCTGAGG (Motif 3)

A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
Reverse Opposite:
A G T C A T G C A G C T A G T C C G T A A C T G C T G A A C T G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.4 +/- 26.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCACTGTCTCTGAGG-
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCACTGTCTCTGAGG
GTCACGCTCNCTGA--
 A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGCACTGTCTCTGAGG
RGGGCACTAACY------
 A C G T A C G T A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GGCACTGTCTCTGAGG
----CTGTTCCTGG--
 A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GGCACTGTCTCTGAGG
NNNNTGAGCACTGTNNG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGCACTGTCTCTGAGG
---GCTGTG-------
 A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GGCACTGTCTCTGAGG
-GCTCGGSCTC-----
 A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GGCACTGTCTCTGAGG----
GGAGCTGTCCATGGTGCTGA
 A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GGCACTGTCTCTGAGG
NGTGGGCAT-----------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GGCACTGTCTCTGAGG
CTTGGCANNNTGCCAA---
 A C G T A C G T A C G T A C T G A C T G A G T C C T G A A G T C A C G T A C T G C G A T T A G C A G C T A G T C C G A T A C T G C T G A A T C G A C T G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T A C G T A C G T