Information for 3-AGAGGGAGCCCTA (Motif 2)

C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A
Reverse Opposite:
A C G T C T G A A C T G C T A G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A G T C A G C T
p-value:1e-16
log p-value:-3.719e+01
Information Content per bp:1.875
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.5 +/- 7.7bp
Average Position of motif in Background55.7 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCCCTA--
TTGGGGGCGCCCCTAG
 A C G T C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGAGGGAGCCCTA
---CGGAGC----
 C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGAGGGAGCCCTA
---GGGAGGACNG
 C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCCCTA
GGGCGGGAAGG---
 A C G T C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAGGGAGCCCTA----
NNNNTGAGCACTGTNNG
 C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCCCTA
GGGCGGGACC----
 A C G T C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAGGGAGCCCTA
GGCGGGAARN---
 C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGAGCCCTA-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGAGCCCTA---
NNNNGGTACCCCCCANN
 A C G T C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGAGCCCTA
GRTGMTRGAGCC---
 A C G T A C G T C T G A A C T G C G T A A C T G A C T G A C T G C G T A A T C G A G T C A G T C A G T C A G C T T G C A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T