Information for 4-GAAATGGCACCACCTG (Motif 3)

T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G
Reverse Opposite:
G A T C T G C A A C T G C A T G A C G T A C T G A T C G A G C T A T C G A G T C G T A C C G T A A G C T A C G T A G C T A G T C
p-value:1e-19
log p-value:-4.479e+01
Information Content per bp:1.676
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif44.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.0 +/- 18.2bp
Average Position of motif in Background47.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3/MA0469.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGCACCACCTG-
AAAAATGGCGCCATTTTT
 A C G T T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAATGGCACCACCTG--
-NNNNGGTACCCCCCANN
 T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

E2F2/MA0864.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAATGGCACCACCTG
AAAATGGCGCCATTTT
 T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGCACCACCTG
ATAAATGACACCTATCA
 A C G T T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGCACCACCTG
CAAGATGGCGGC-----
 A C G T T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAAATGGCACCACCTG
NNNGGGGCGCCCCCNN
 T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAATGGCACCACCTG
ADGGYAGYAGCATCT-
 T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAATGGCACCACCTG-----
-CNNBRGCGCCCCCTGSTGGC
 T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GAAATGGCACCACCTG--
--------ACCACCTGTT
 T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAATGGCACCACCTG-
AGCTCGGCGCCAAAAGC
 T C A G T C G A T G C A C T G A A C G T C A T G C T A G T A G C C T G A A T G C A G T C G T C A G A T C G T A C A C G T C A T G A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C