Information for 10-TAACWGAATTTCM (Motif 7)

C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C T G A G C T A C G T C G T A
p-value:1e-13
log p-value:-3.041e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 33.6bp
Average Position of motif in Background19.6 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2b/MA0681.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAACWGAATTTCM
TAATTTAATTA--
 C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAACWGAATTTCM
NTAATBNAATTA--
 A C G T C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAACWGAATTTCM
TAATTTAATTA--
 C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TAACWGAATTTCM
---GGGAATTTCC
 C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PROP1/MA0715.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAACWGAATTTCM
TAATTTAATTA--
 C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAACWGAATTTCM
---GGGAATTTCC
 C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAACWGAATTTCM
YTAATYNRATTA--
 A C G T C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAACWGAATTTCM-
TTGAATGAAATTCGA
 A C G T C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAACWGAATTTCM-
NNNTATTGAATTGNNN
 A C G T A C G T C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TAACWGAATTTCM
NANTTCATTGAATTA--
 A C G T A C G T A C G T A C G T C G A T C G T A C T G A A G T C C G A T A C T G G T C A C G T A A C G T A C G T A C G T A G T C G T A C
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T