Information for 12-TTGTTCATAGCTG (Motif 9)

C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
Reverse Opposite:
A T G C C G T A A C T G A G T C C G A T G T C A A C G T A C T G T C G A C T G A T A G C C G T A G C T A
p-value:1e-13
log p-value:-3.072e+01
Information Content per bp:1.787
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.7 +/- 19.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTCATAGCTG
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGTTCATAGCTG
TATTGTTTATT----
 A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTCATAGCTG
NNTTTTTCTTATNT-
 A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGTTCATAGCTG
TTGTTTAC-----
 C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTCATAGCTG--
TTTATTAATTGCNNGN
 A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TTGTTCATAGCTG
AATCAATTGTTCCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTCATAGCTG
GAATATTCAT-----
 A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TTGTTCATAGCTG
ANNTCCATTGTTCNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TTGTTCATAGCTG
NNNTCCTTTGTTCTNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TTGTTCATAGCTG
NNTTTATTGTTCTNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T A C T G A G C T A C G T A G T C G T C A A C G T C G T A C T A G G T A C C G A T A T C G
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T A C G T