Information for 4-NCMSRGGGSSCTGYAG (Motif 5)

A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T T C A G A T G C C G T A A C T G A T G C A T G C A G T C A G T C A G T C A G T C A T G C C A G T A C T G A T C G
p-value:1e-19
log p-value:-4.386e+01
Information Content per bp:1.719
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.0 +/- 14.9bp
Average Position of motif in Background36.3 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.52
Offset:9
Orientation:forward strand
Alignment:NCMSRGGGSSCTGYAG
---------GCTGTG-
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:NCMSRGGGSSCTGYAG-
-TTGGGGGCGCCCCTAG
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:NCMSRGGGSSCTGYAG-
-----GGGAATTGTAGT
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-NCMSRGGGSSCTGYAG
GGGGCCGAGGCCTG---
 A C G T A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:NCMSRGGGSSCTGYAG
------AGGCCTNG--
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----NCMSRGGGSSCTGYAG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:NCMSRGGGSSCTGYAG
--------NGCTN---
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:NCMSRGGGSSCTGYAG
---NRRGGGTCTT---
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:NCMSRGGGSSCTGYAG----
---AATCGCACTGCATTCCG
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:NCMSRGGGSSCTGYAG
------AGGCCTAG--
 A T G C A G T C G T C A A T C G C T A G T A C G C T A G A C T G T A C G A T C G A G T C C G A T T A C G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T