Information for 9-TKTTAGAATCWGA (Motif 4)

C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A C T A G C G T A A C G T C G A T G T A C A C G T C G T A G T C A G T A C C G T A
p-value:1e-19
log p-value:-4.386e+01
Information Content per bp:1.759
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 32.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TKTTAGAATCWGA
NCGTATTATAATCNTA
 A C G T A C G T A C G T C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TKTTAGAATCWGA
NANTATTATAATTNNN
 A C G T A C G T A C G T C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TKTTAGAATCWGA
NNTAATTATAATNANN
 A C G T A C G T A C G T C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TKTTAGAATCWGA
NNTAATTATAATTNNN
 A C G T A C G T A C G T C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TKTTAGAATCWGA
CCGTATTATAAACAA-
 A C G T A C G T A C G T C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TKTTAGAATCWGA
-TCTAAAAATAGA
 C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TKTTAGAATCWGA-
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TKTTAGAATCWGA
-ACTATAAATAGA
 C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TKTTAGAATCWGA
-ATTTGAATT---
 C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TKTTAGAATCWGA
--TTTGAAACCG-
 C G A T C A T G A C G T C G A T C G T A C A T G C G T A C G T A C G A T A G T C C G A T C T A G C G T A
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T