Information for 22-GACGTAATCC (Motif 29)

A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G G T C A A C G T A C G T C G T A A G T C C T A G A G C T A G T C
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 23.1bp
Average Position of motif in Background48.3 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.76
Offset:4
Orientation:forward strand
Alignment:GACGTAATCC--
----TAATCCCN
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GACGTAATCC-
--CTTAATCCC
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GACGTAATCC-
---TTAATCCC
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GACGTAATCC-
---TTAATCCG
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GACGTAATCC-
---YTAATCCY
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GACGTAATCC--
--CCTAATCCGC
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GACGTAATCC-
---TTAATCCT
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GACGTAATCC--
--GCTAATCCCC
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GACGTAATCC--
--NYTAATCCYB
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GACGTAATCC
--GCTAATCC
 A C T G C T G A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A G T C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C