Information for 19-AMAAAGARAT (Motif 25)

C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T
Reverse Opposite:
G T C A G A C T G A T C A C G T T A G C A G C T C G A T A C G T C A G T G A C T
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.624
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.5 +/- 30.3bp
Average Position of motif in Background57.2 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AMAAAGARAT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AMAAAGARAT
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AMAAAGARAT
DCYAAAAATAGM-
 A C G T A C G T A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AMAAAGARAT-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AMAAAGARAT--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AMAAAGARAT--
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AMAAAGARAT---
AAAAAATCAATAAT
 A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AMAAAGARAT---
AAAAAATCGATAAT
 A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AMAAAGARAT---
AAAAAATCGATAAT
 A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AMAAAGARAT
TCTAAAAATAGA-
 A C G T A C G T A C G T C T G A G T C A T G C A G C T A C T G A A C T G T G C A C T A G C G T A A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T