Information for 21-GAATATGGCTGTA (Motif 23)

A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
Reverse Opposite:
G C A T C T G A G T A C C G T A A C T G A G T C G A T C G C T A C A G T C G T A C A G T A G C T G T A C
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.685
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.8 +/- 21.3bp
Average Position of motif in Background52.6 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GAATATGGCTGTA
CAAGATGGCGGC-
 A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAATATGGCTGTA
CAAGATGGCGGC-
 A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAATATGGCTGTA
--TAATGGCGGNC
 A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NEUROD2/MA0668.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAATATGGCTGTA
ACCATATGGC----
 A C G T A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAATATGGCTGTA
ACATATGG-----
 A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GAATATGGCTGTA
------NGCTN--
 A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAATATGGCTGTA
----TWGTCTGV-
 A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAATATGGCTGTA
CTAATATTGCTAAA
 A C G T A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAATATGGCTGTA
CTAATATTGCTAAA
 A C G T A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAATATGGCTGTA
NNATAAGGNN---
 A C T G T C G A G C T A C G A T G C T A C G A T C T A G C T A G T A G C C G A T A C T G G A C T C G T A
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T