Information for 3-WKYGGWMACTGCAGSC (Motif 5)

C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C
Reverse Opposite:
C T A G A T G C A G T C A C G T A C T G A G T C C G T A A C T G A C G T A C G T G C A T A G T C A G T C T C G A G T A C C G A T
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 19.4bp
Average Position of motif in Background35.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WKYGGWMACTGCAGSC--
-AATCGCACTGCATTCCG
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------WKYGGWMACTGCAGSC
TGGCCANNNNNGGAACTGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:WKYGGWMACTGCAGSC--
------CACAGCAGGGGG
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WKYGGWMACTGCAGSC--
---GAGCACAGCAGGACA
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:WKYGGWMACTGCAGSC
---GGGAATTGTAGT-
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:WKYGGWMACTGCAGSC
-----DCTCAGCAGG-
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C
A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:WKYGGWMACTGCAGSC--
---CCACACAGCAGGAGA
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:WKYGGWMACTGCAGSC--
--GGGTTACTANAGGTCA
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C A C G T A C G T
A C G T A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:WKYGGWMACTGCAGSC----
-----DCHCAGCAGGRGGCC
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:WKYGGWMACTGCAGSC
-----AAACCGCAA--
 C G T A A C T G A G C T A C T G A C T G C G T A G T C A G T C A A G T C A C G T C T A G A G T C C G T A A C T G A T C G A G T C
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T