Information for 6-AAGAACAAGMACA (Motif 3)

C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A
Reverse Opposite:
A G C T A C T G C G A T C A T G G T A C A G C T C G A T A T C G A C G T G C A T G T A C A C G T A C G T
p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.752
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 34.9bp
Average Position of motif in Background57.8 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAGAACAAGMACA
AACAAACAACAAGAG--
 A C G T A C G T A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAGAACAAGMACA
NTTNAGAACAATTA--
 A C G T A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGMACA-
TTAAGAACAATAAATT
 A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAGAACAAGMACA
AAAAATAACAAACGG-
 A C G T A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGMACA-
TTTAGAACAATAAAAT
 A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAGAACAAGMACA-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGAACAAGMACA-
NNNTAACAATTATAN
 A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGAACAAGMACA--
TNNAGAACAATANATNN
 A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAGAACAAGMACA
CAAACAACAACACCT---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGAACAAGMACA
NNTNANAACAATTNNA
 A C G T A C G T A C G T C G T A C G T A C A T G C G T A C G T A T A G C C G T A C T G A A C T G G T A C C G T A G T A C T C G A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A