Information for 7-GCCAAATAAC (Motif 6)

A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 20.9bp
Average Position of motif in Background85.5 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAATAAC
TGCCAA-----
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATAAC
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATAAC
GGTGCCAAGT---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCAAATAAC
GCCAATTAAC
 A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCAAATAAC------
-AAAAATAACAAACGG
 A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

HESX1/MA0894.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCCAAATAAC
NCCAATTANC
 A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCAAATAAC
-CCAATTAA-
 A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

GBX1/MA0889.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCAAATAAC
ACTAATTAGC
 A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

ESX1/MA0644.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCAAATAAC
ACCAATTAAC
 A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
T C G A G A T C G A T C T C G A G T C A G A C T G A C T G C T A T C G A G T A C

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCAAATAAC
-CCAATTAA-
 A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A G T C
A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T