Information for 8-ACCCCCTTGCTGT (Motif 5)

C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T
Reverse Opposite:
C T G A T A G C G C T A A C T G T A G C G C T A G C T A T A C G C T A G T C A G A C T G A T C G G A C T
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.722
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif22.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.6 +/- 27.8bp
Average Position of motif in Background44.1 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACCCCCTTGCTGT-
--CCCCCTGCTGTG
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACCCCCTTGCTGT--
GGCCYCCTGCTGDGH
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCCCCTTGCTGT-
GACCCCCCGCTGTG
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACCCCCTTGCTGT
CGCCCCCTGACA--
 A C G T C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACCCCCTTGCTGT--
GACCCCCCGCTGCGC
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCCCCTTGCTGT----
--TCNCCTGCTGNGNNN
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACCCCCTTGCTGT--
-----CCTGCTGAGH
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACCCCCTTGCTGT----
--TNTCCTGCTGTGNNG
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACCCCCTTGCTGT----
--NNTCCTGCTGTGNNN
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACCCCCTTGCTGT--
GACCCCCCGCTGTGC
 C T G A T A G C T G A C A G T C G A T C A G T C C G A T C G A T A T C G A G T C C A G T A T C G A G C T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C