Information for 6-CAAATAGTTT (Motif 4)

G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
Reverse Opposite:
C G T A C G T A C G T A G A T C A C G T T C G A A G C T A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.278e+01
Information Content per bp:1.818
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif134.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets54.5 +/- 32.9bp
Average Position of motif in Background54.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAAATAGTTT
CCAAAAATAG---
 A C G T A C G T A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAAATAGTTT
DCYAAAAATAGM--
 A C G T A C G T A C G T A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAAATAGTTT
ATGCTAAAAATAGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAAATAGTTT
KCCAAAAATAGC--
 A C G T A C G T A C G T A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAAATAGTTT
--AATAATT-
 G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAAATAGTTT
NTAATKGTTT
 G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAAATAGTTT
WAAGTAAAYA----
 A C G T A C G T A C G T A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAATAGTTT
CCAATTAA---
 A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAAATAGTTT
GCTAAAAATAGC--
 A C G T A C G T A C G T A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAATAGTTT
CCAATTAA---
 A C G T G T A C C G T A G T C A C T G A A G C T C G T A C A T G G C A T G C A T A C G T
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T