Information for 5-TCCAGGTCCACACGGC (Motif 3)

A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C A C T G G A C T A T C G A C G T A C T G T A C G C G T A G T A C A G T C A C G T A C T G A C T G C G T A
p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.4 +/- 25.2bp
Average Position of motif in Background60.5 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCCAGGTCCACACGGC--
--NNTTTGCACACGGCCC
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C A C G T A C G T
A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCAGGTCCACACGGC
-VCAGGTRDRY-----
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCCAGGTCCACACGGC--
----TTTGCACACGGCAC
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCCAGGTCCACACGGC
ATCCACAGGTGCGAAAA--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCCAGGTCCACACGGC---
--CAAATCCAGACATCACA
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCCAGGTCCACACGGC
NNCAGGTGCG------
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TCCAGGTCCACACGGC-
-------CCAGACRSVB
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TCCAGGTCCACACGGC
-------CCAGACAG-
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TCCAGGTCCACACGGC
GGGGTCAAAGTCCAAT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCCAGGTCCACACGGC
TCAAGGTCATA-----
 A C G T A G T C A G T C C G T A C T A G A C T G A C G T A G T C A G T C C G T A A T G C C G T A A G T C C T A G A C T G A T G C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T A C G T