Information for 4-AGCGCCYCCTGGGAGG (Motif 2)

C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G
Reverse Opposite:
A G T C G A T C A G C T A G T C G A T C A T G C C G T A A C T G A C T G T C G A C T A G A C T G A T G C A T C G A G T C G A C T
p-value:1e-13
log p-value:-3.177e+01
Information Content per bp:1.782
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 18.1bp
Average Position of motif in Background78.0 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCYCCTGGGAGG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGCGCCYCCTGGGAGG-
--CCCCCCCGGGGGGGT
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCGCCYCCTGGGAGG-
--CCCCCCCGGGGGGGT
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGCGCCYCCTGGGAGG-
--RGSMTBCTGGGAAAT
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCGCCYCCTGGGAGG
--CACCCCCGGGGGGG
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCGCCYCCTGGGAGG
--CGCCCCCTGACA--
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G
A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCGCCYCCTGGGAGG
-TNTCCTGCTGTGNNG
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCYCCTGGGAGG--
TAGCGCCCCCTGGTGGCCA
 A C G T C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCGCCYCCTGGGAGG
-TCNCCTGCTGNGNNN
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCGCCYCCTGGGAGG
---GTCCCCAGGGGA-
 C T G A A C T G A T G C A T C G G T A C A G T C A G C T A G T C A G T C A C G T A T C G C T A G T C A G C T G A C A T G A C T G
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T