Information for 1-CAHGGAGGMKCCW (Motif 7)

A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
Reverse Opposite:
C G A T C T A G A C T G T G A C A C G T A G T C G T A C G C A T A T G C A G T C C G A T C G A T A C T G
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.644
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif5.68%
Number of Background Sequences with motif554.9
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets44.5 +/- 23.8bp
Average Position of motif in Background51.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAHGGAGGMKCCW
--GGGAGGACNG-
 A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAHGGAGGMKCCW
TBGCACGCAA------
 A C G T A C G T A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAHGGAGGMKCCW
CACGCA-------
 A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAHGGAGGMKCCW
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

ELF5/MA0136.2/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CAHGGAGGMKCCW
ACCCGGAAGTA---
 A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CAHGGAGGMKCCW---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAHGGAGGMKCCW
GCACGTACCC----
 A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:-8
Orientation:forward strand
Alignment:--------CAHGGAGGMKCCW
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAHGGAGGMKCCW
AVCAGGAAGT----
 A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CAHGGAGGMKCCW
AGTCACGC--------
 A C G T A C G T A C G T A G T C G C T A G C T A A C T G T A C G C G T A A C T G T A C G G T C A A C T G G T A C G A T C G C T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T