Information for 21-MCMCCTGWCACWYCAA (Motif 36)

G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C T A G C G A T A C T G A C G T A C T G C G A T G T A C C G T A A C T G A C T G A C G T A C T G A C G T
p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.864
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 24.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--MCMCCTGWCACWYCAA
CGCCCCCTGACA------
 A C G T A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--MCMCCTGWCACWYCAA
AAAGACCTGTCAATCC--
 A C G T A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--MCMCCTGWCACWYCAA
TGACACCTGTCA------
 A C G T A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--MCMCCTGWCACWYCAA
AAGCACCTGTCAATAT--
 A C G T A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:MCMCCTGWCACWYCAA
--VGCTGWCAVB----
 G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--MCMCCTGWCACWYCAA
TGACACCTGTCA------
 A C G T A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-MCMCCTGWCACWYCAA
TACACCTGTC-------
 A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-MCMCCTGWCACWYCAA
NNCACCTGNN-------
 A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MCMCCTGWCACWYCAA
NCACCTGTN-------
 G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--MCMCCTGWCACWYCAA
AATTACCTGTCAATAC--
 A C G T A C G T G T A C A G T C G T C A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A G T C G C A T A G T C A G T C C G T A C G T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T