Information for 5-GCTGTRACGAATG (Motif 21)

T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
Reverse Opposite:
A G T C C T G A C G A T A G C T T G A C T A C G A G C T A G C T C G T A A G T C C G T A A T C G A G T C
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.715
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif99.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets50.2 +/- 26.0bp
Average Position of motif in Background50.5 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTRACGAATG
AGGACGCTGTAAAGGGA-
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTRACGAATG
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTRACGAATG
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTGTRACGAATG
GCTGTG-------
 T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTGTRACGAATG-
NNTNTCATGAATGT
 T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTGTRACGAATG
VGCTGWCAVB----
 A C G T T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGTRACGAATG
NNNCAGCTGTCAATATN-
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTGTRACGAATG
GCTGTCAA-----
 T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTGTRACGAATG--
ACCGTGACTAATTNN
 T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTGTRACGAATG
CCTGTCAA-----
 T A C G A T G C A C G T A C T G C G A T C T G A C T G A A G T C A C T G C T G A C G T A A G C T T A C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T