Information for 5-TAAGGACTGC (Motif 14)

A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C
Reverse Opposite:
A C T G G A T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T C G T A
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 12.9bp
Average Position of motif in Background39.6 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGACTGC---
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAAGGACTGC---
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAAGGACTGC
--AGGCCTNG
 A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAAGGACTGC
NCTGGAATGC
 A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGACTGC---
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0073.1_Hoxc9/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGGACTGC-
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGACTGC
NNATAAGGNN---
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGACTGC---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAAGGACTGC-
-AAGCACTTAA
 A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAAGGACTGC
CAAGGHCANV
 A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T C T A G A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G