Information for 10-GTGGTYAAGC (Motif 23)

A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
Reverse Opposite:
C T A G A G T C G A C T G C A T T C G A T C G A T A G C A T G C C G T A T A G C
p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.739
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif3.97%
Number of Background Sequences with motif594.7
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets45.4 +/- 23.8bp
Average Position of motif in Background49.1 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGGTYAAGC
GCTGTGGTTT---
 A C G T A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTYAAGC
CTGTGGTTTN--
 A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTYAAGC
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTYAAGC
NNTGTGGTTT---
 A C G T A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTGGTYAAGC
GTCTGTGGTTT---
 A C G T A C G T A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTYAAGC--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGTYAAGC
GTGGAT----
 A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTYAAGC--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTYAAGC
CTGTTGCTAGGS
 A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTYAAGC--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A T C G C G A T A T C G A T C G A G C T A G C T C G T A C T G A A C T G G A T C A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C