Information for 8-GCCTGCACGT (Motif 17)

A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T
Reverse Opposite:
C T G A T G A C C T A G A C G T A C T G G T A C T G C A A C T G T C A G T G A C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.817
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif545.7
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets41.0 +/- 19.5bp
Average Position of motif in Background50.8 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:GCCTGCACGT--
----GCACGTAY
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GCCTGCACGT-
---BGCACGTA
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GCCTGCACGT--
----GCACGTNC
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GCCTGCACGT----
----GCACGTACCC
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GCCTGCACGT-
-----CACGTG
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

Id2/MA0617.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCCTGCACGT--
----GCACGTGA
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCCTGCACGT--
----GCACGTGT
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCTGCACGT---
---NGCACGTGNT
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCCTGCACGT----
----KCACGTGMCN
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCCTGCACGT---
---GGCACGTGTC
 A C T G A G T C G T A C A C G T A C T G A G T C G T C A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C