Information for 5-AGGCAAAGCADGCATA (Motif 8)

C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
Reverse Opposite:
A C G T C G T A A C G T C T A G G T A C G A C T A C G T A C T G A G T C A C G T C A G T A C G T A T C G T A G C A G T C G A C T
p-value:1e-11
log p-value:-2.620e+01
Information Content per bp:1.737
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.6 +/- 16.3bp
Average Position of motif in Background38.0 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGCAAAGCADGCATA
TGCCAAAATAAACANN
 C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGGCAAAGCADGCATA-----
----AAAATATGCATAATAAA
 C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AGGCAAAGCADGCATA
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAAGCADGCATA
GAGSCCGAGC-------
 A C G T C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGGCAAAGCADGCATA
GAGCACAGCAGGACA-
 C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAAAGCADGCATA
GAAAGTGAAAGT-------
 A C G T A C G T A C G T C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AGGCAAAGCADGCATA--
-GGGRAARRGRMCAGMTG
 C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A A C G T A C G T
A C G T C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.47
Offset:9
Orientation:forward strand
Alignment:AGGCAAAGCADGCATA---
---------ATGMATATDC
 C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AGGCAAAGCADGCATA
CCACACAGCAGGAGA-
 C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AGGCAAAGCADGCATA
CCAGGAACAG--------
 A C G T A C G T C T G A C T A G A T C G A T G C T G C A G T C A C G T A T A C G G T A C G T C A C T G A C A T G A G T C C G T A A C G T G T C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T