Information for 3-TCTCTTTTATGAT (Motif 6)

A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T C G T A G T C A G T C A G T C A A C T G C G T A C T A G C T G A
p-value:1e-11
log p-value:-2.656e+01
Information Content per bp:1.886
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.5 +/- 22.7bp
Average Position of motif in Background50.7 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCTCTTTTATGAT
---NTTTTACGAC
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCTCTTTTATGAT
---NTTTTATGAC
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCTCTTTTATGAT
----TTTTATTGC
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCTCTTTTATGAT
---NTTTTACGAC
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCTCTTTTATGAT--
----TTTTATGGCTN
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTCTTTTATGAT-
--ANTTTTACGACC
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTCTTTTATGAT-
--DGWTTTATGRCN
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCTCTTTTATGAT-
----TTTTATTRGN
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCTCTTTTATGAT-
---NTTTTACGACC
 A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTTTTATGAT---
NNCTTTGTTTTGNTNNN
 A C G T A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T G T C A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T