Information for 3-GTATTAACATTTAAWY (Motif 3)

A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C
Reverse Opposite:
T C A G C G T A A C G T A C G T C G T A G T C A C G T A C G A T A C T G C G A T G A C T G T C A G T C A A C G T C T G A A T G C
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 26.3bp
Average Position of motif in Background27.4 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTATTAACATTTAAWY--
-AATATACATGTAATATA
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C A C G T A C G T
A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTATTAACATTTAAWY--
-AATATACATGTAAAACA
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C A C G T A C G T
A C G T C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTATTAACATTTAAWY--
-AAAATACATGTAAAAAT
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C A C G T A C G T
A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTATTAACATTTAAWY
ATATTTACATA-----
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTATTAACATTTAAWY--
-TAAATACATGTAAAATT
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C A C G T A C G T
A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTATTAACATTTAAWY--
-AATATACATGTAAAATT
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTATTAACATTTAAWY--
-AAAATACATGTAATACT
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTATTAACATTTAAWY
----TGACCTTTNCNT
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTATTAACATTTAAWY
---TTGACTTTT----
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTATTAACATTTAAWY
-----ANCGTTTANN-
 A T C G G A C T C G T A C A G T A C G T C T G A C G T A A G T C C G T A A C G T A C G T C G A T G T C A G T C A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T