Information for 2-CAARRKAGTT (Motif 23)

T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T
Reverse Opposite:
T C G A T C G A T G A C G A C T G T C A G A C T A G C T G C A T A C G T A C T G
p-value:1e-4
log p-value:-1.080e+01
Information Content per bp:1.571
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif10.52%
Number of Background Sequences with motif3056.1
Percentage of Background Sequences with motif6.29%
Average Position of motif in Targets51.2 +/- 27.3bp
Average Position of motif in Background52.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAARRKAGTT--
CAAGATGGCGGC
 T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAARRKAGTT
--TGTCGGTT
 T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAARRKAGTT
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAARRKAGTT--
-AAGAGGATTAG
 T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T A C G T A C G T
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAARRKAGTT
CCAAAAATAG--
 A C G T A C G T T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAARRKAGTT--
--TGGCAGTTGN
 T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CAARRKAGTT
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAARRKAGTT-----
TACTAAGTACTTAAATG
 A C G T A C G T T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAARRKAGTT-
-NTAATKGTTT
 T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

GRHL1/MA0647.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAARRKAGTT--
AAAACCGGTTTT
 T G A C G T C A C G T A T C G A C T G A C A G T C T G A A C T G A G C T A C G T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T