Information for 8-TCAGATGCACAAA (Motif 18)

C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T C G A T A T C G A C G T C T A G A G T C T G C A A C G T A T G C A C G T A C T G G C T A
p-value:1e-8
log p-value:-1.903e+01
Information Content per bp:1.730
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif86.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets36.1 +/- 26.7bp
Average Position of motif in Background47.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAGATGCACAAA------
--AGAAGAACAAAGGACTA
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCAGATGCACAAA---
-CAATTGCAAAAATAT
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCAGATGCACAAA--
-----GGAACAAAGR
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAGATGCACAAA-----
--CGAAGCACACAAAATA
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCAGATGCACAAA--
-----AAAACAAAGG
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGATGCACAAA------
--ATAAGAACAAAGGACTA
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGATGCACAAA-----
--AAACAGACAAAGGAAT
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCAGATGCACAAA--
-----VRRACAAWGG
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TCAGATGCACAAA-
--------ACAAAG
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCAGATGCACAAA--
-----RNAACAATGG
 C G A T T A G C G T C A A T C G G T C A A C G T C T A G A G T C C G T A A T G C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G