Information for 1-GAAWTCTKMMWGC (Motif 4)

A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C G C A T A C G T A C G T G T C A C G T A C T A G G T C A C G A T A C G T A C G T A G T C
p-value:1e-12
log p-value:-2.766e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.4 +/- 18.0bp
Average Position of motif in Background55.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAWTCTKMMWGC
TGAATTATGCAT--
 A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAAWTCTKMMWGC
AAGGCGAAATCATCGCA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GAAWTCTKMMWGC
NNNCTGATATCTCNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAAWTCTKMMWGC
ATGAATWATTCATGA
 A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GAAWTCTKMMWGC
NCTGGAATGC-------
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GAAWTCTKMMWGC
AAAATTGTTATGAA
 A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GAAWTCTKMMWGC
NACAGGAAAT--------
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GAAWTCTKMMWGC
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------GAAWTCTKMMWGC
AAGATCGGAANTNNNA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAAWTCTKMMWGC
ATGAATAATTAATG-
 A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T G T C A G T C A C G T A A C T G A G T C
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T