Information for 16-ACATACATSATGTATG (Motif 29)

G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G
Reverse Opposite:
T G A C G C T A G A C T G C T A A T G C C T G A A G C T A T G C C T G A A C G T A C T G C A G T C G T A C G A T A C T G C A G T
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.747
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.8 +/- 18.5bp
Average Position of motif in Background67.6 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACATACATSATGTATG
GYCATCMATCAT-----
 A C G T G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACATACATSATGTATG
WYATGCATWATGCAT-
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACATACATSATGTATG
AAGAACATWHTGTTC-
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACATACATSATGTATG-
GGGTACATAATGTTCCC
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACATACATSATGTATG-
TCACCCATCAATAAACA
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ACATACATSATGTATG
TCATGAATWATTCAT-
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ACATACATSATGTATG
-CATTAATTATTCAT-
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G
A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACATACATSATGTATG-
--GRACAGWMTGTYCTB
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G A C G T
A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ACATACATSATGTATG-
GGGAACATTGTGTTCCC
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ACATACATSATGTATG
------ATGATGCAAT
 G C T A G T A C C G T A G A C T G T C A G T A C C G T A G A C T A T C G C T G A A G C T A T C G C G A T C G T A C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T