Information for 11-TAAWRACCGA (Motif 23)

A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C C T A G A C T G A C G T A G T C C G A T A G C T A C G T C G T A
p-value:1e-8
log p-value:-1.899e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 19.2bp
Average Position of motif in Background53.9 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAAWRACCGA-
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0023.1_Dlx4/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TAAWRACCGA-
GCGCTATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

EMX1/MA0612.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAAWRACCGA
CCTAATTACC--
 A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAAWRACCGA
NNTAATTANN--
 A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAAWRACCGA
GNTAATTANN--
 A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TAAWRACCGA-
TCGCGATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAAWRACCGA
NTTAATTACN--
 A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAAWRACCGA
TTAATTAN---
 A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAAWRACCGA
GNTAATTAGN--
 A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAAWRACCGA
NNTAATTANN--
 A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A A G T C A G T C A C T G C G T A
A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T A C G T A C G T