Information for 11-TGCTTGHTGAAGAAAA (Motif 21)

A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A G T C A C G T C G A T A T G C C G T A C A G T A G T C C G T A C G T A A C T G G T A C C G T A
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.817
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 19.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTGHTGAAGAAAA
TTTGATTGATGN------
 A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCTTGHTGAAGAAAA
NNANTGATTGATNTTN----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCTTGHTGAAGAAAA
TGATTGATGA------
 A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGHTGAAGAAAA
TTGATTGN---------
 A C G T A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCTTGHTGAAGAAAA
NNANTGATTGATNNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGHTGAAGAAAA
ATGATKGATGRC-----
 A C G T A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGCTTGHTGAAGAAAA
NNNNNATTGATGNGTGN--
 A C G T A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCTTGHTGAAGAAAA
TAATTGTTCTAAAC--
 A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGCTTGHTGAAGAAAA------
-----GTTAAAAAAAAAAATTA
 A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGCTTGHTGAAGAAAA
TTCAATTGTTCTAAAA--
 A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C T G G C T A A C G T A T C G C G T A C G T A C T A G G T C A C G T A G T C A C G T A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T