Information for 10-GTCTTDCTTCACT (Motif 17)

A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T A C T G C G T A G T C A A C T G G A T C C G T A C T G A A T C G C G T A A G T C
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.0 +/- 12.1bp
Average Position of motif in Background38.6 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTCTTDCTTCACT
----TACGTCAT-
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T
A C G T A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCTTDCTTCACT--
GTCATGCHTGRCTGS
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5/MA0014.2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCTTDCTTCACT------
GTCACGCTTGGCTGCNCNN
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCTTDCTTCACT-
-TATTGCATCATCC
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T A C G T
A C G T A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTCTTDCTTCACT
--VTTRCATAAY-
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T
A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T

DBP/MA0639.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCTTDCTTCACT
-NGTTACGTAATN
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T
A C G T A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCTTDCTTCACT-----
-CCTTAGTTAACTAAAAT
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTDCTTCACT--
NGTCACGCTTGGCTGC
 A C G T A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCTTDCTTCACT---
CGTCACGCATGACTGCA
 A C G T A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

TEF/MA0843.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCTTDCTTCACT
-TATTACGTAACA
 A C T G A C G T A T G C A G C T A C G T C A T G A G T C A C G T A C G T G T A C C G T A A G T C C G A T
A C G T A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A