Information for 10-SRSACASARWMAARAT (Motif 16)

A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A C G T A C T G C G A T G A C T A C G T A T C G A C G T A C T G A C G T A T G C G A C T A T G C
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.6 +/- 23.6bp
Average Position of motif in Background50.7 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---SRSACASARWMAARAT
CGAAGCACACAAAATA---
 A C G T A C G T A C G T A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SRSACASARWMAARAT-
---AAATAAGAAAAAAC
 A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:SRSACASARWMAARAT---
----AACAAACAACAAGAG
 A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:SRSACASARWMAARAT----
------AAGATAAGATAACA
 A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---SRSACASARWMAARAT
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:SRSACASARWMAARAT
---NCTAAGTAAACA-
 A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T
A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:SRSACASARWMAARAT--
---NCWRWGTAAACANSV
 A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SRSACASARWMAARAT-
-TGCCAAAATAAACANN
 A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SRSACASARWMAARAT---
----CAAAGTAAACANNNN
 A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-SRSACASARWMAARAT-
WNAGTCADAVTGAAACTN
 A C G T A T C G C T G A A T C G C G T A A G T C C G T A A T G C C G T A C T A G C G T A G T A C C G T A C G T A C T A G C G T A A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G