Information for 8-CATAGTGATT (Motif 10)

A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T
Reverse Opposite:
C G T A C T G A A G C T T A G C C G T A A G T C C G A T C T G A C G A T A C T G
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.842
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif104.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets43.9 +/- 26.8bp
Average Position of motif in Background49.7 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATAGTGATT--
--CNGTGATTTN
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATAGTGATT
CTCATTGTC---
 A C G T A C G T A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CATAGTGATT--
----TTGATTGN
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CATAGTGATT
---AATAATT
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATAGTGATT----
NTTATTGATTTTTT
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATAGTGATT---
---ATTGATTYND
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

ONECUT1/MA0679.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CATAGTGATT----
ANTATCGATTTTTN
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATAGTGATT-
-GCAGTGATTT
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATAGTGATT-------
-NNANTGATTGATNNNN
 A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATAGTGATT
CCATTGTTYB-
 A C G T A G T C C G T A A G C T C G T A C T A G C G A T A T C G T C G A A G C T A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T