Information for 15-TGCAAAGGRCRGA (Motif 18)

A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T A C G T A T C G A G T C C G T A
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.919
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 28.4bp
Average Position of motif in Background55.9 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGCAAAGGRCRGA
--CAAAGGTCAG-
 A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCAAAGGRCRGA
ANGNAAAGGTCA--
 A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGCAAAGGRCRGA
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCAAAGGRCRGA
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAAGGRCRGA
TGGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAAGGRCRGA
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCAAAGGRCRGA
GTAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAGGRCRGA
ACWTCAAAGG-----
 A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAGGRCRGA
ACATCAAAGG-----
 A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAAGGRCRGA
ATATGCAAATNNN---
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A C G T A A C T G A C T G C T A G G T A C C T A G A C T G C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T