Information for 9-CTGGAATTTC (Motif 13)

T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C
Reverse Opposite:
T C A G T C G A G C T A T G C A A G C T A C G T A T G C G T A C C G T A A T C G
p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.657
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif8.24%
Number of Background Sequences with motif1546.2
Percentage of Background Sequences with motif3.35%
Average Position of motif in Targets47.3 +/- 27.3bp
Average Position of motif in Background49.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTGGAATTTC-
-GGGAATTTCC
 T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CTGGAATTTC-
-GGGAATTTCC
 T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTGGAATTTC
NCTGGAATGC-
 A C G T T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTGGAATTTC
CCWGGAATGY-
 A C G T T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTGGAATTTC
CCWGGAATGY-
 A C G T T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTGGAATTTC
NTGGAATGTN
 T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTGGAATTTC-
-GGGGATTTCC
 T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGGAATTTC
-TGGAATGT-
 T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTGGAATTTC-
-GGGGATTTCC
 T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGGAATTTC---
-GGGAAATCCCCN
 T A G C G C A T C A T G T A C G T G C A T C G A A C G T C G A T A G C T A G T C A C G T A C G T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T