Information for 10-TGCSWTTCTKCAA (Motif 10)

A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G T G A C C G T A A C T G C G T A C G T A C G A T A T G C C A T G A G T C C G T A
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.892
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.9 +/- 29.9bp
Average Position of motif in Background49.2 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGCSWTTCTKCAA---
-ANATTTTTGCAANTN
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCSWTTCTKCAA-
---NATTGTGCAAT
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGCSWTTCTKCAA-
----RTTATGYAAB
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGCSWTTCTKCAA-
----ATTGCGCAAC
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGCSWTTCTKCAA-
-----TTATGCAAT
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCSWTTCTKCAA
-NCCATTGTTC--
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCSWTTCTKCAA
-NCCATTGTTY--
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGCSWTTCTKCAA-
----ATTGCGCAAT
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGCSWTTCTKCAA
CCTTGCAATTTTTNN-
 A C G T A C G T A C G T A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGCSWTTCTKCAA-
----ATTGCGCAAT
 A C G T A C T G G T A C A T C G C G T A A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T